PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW05960.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 435aa    MW: 46974.9 Da    PI: 8.0867
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW05960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH277.6e-09173194426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 + C++f++ G Ck+Gd C FaHg
  RWW05960.1 173 AACPDFRK-GGCKRGDACEFAHG 194
                 78******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MGRFADHLVL RMPDTVLSSL HVSHLLLKTD CRHRYLVSSC FVSPTLPSPT PRASERLPPW  60
SSAFEDAAVG VGYQLAAGGG GGASGEYGLG ESALAAALQR YLPCNGEETV AEEDVDEPDA  120
AVDVYSSDEF RMYEFKVRRC ARGRSHDWTE CPFAHPGEKA RRRDPRKYHY SGAACPDFRK  180
GGCKRGDACE FAHGVFECWL HPARYRTQPC KDGTACRRRV CFFAHTADQL RVLPPPQQQQ  240
QLQAPTKAVA AVESYDGSPL RQQALETYLS KHLISSSPTS TLISPPMSPP SDSPPVSPST  300
AALRRASWPM RTSLNEIEAS LRQLQLSKAK SSPGSWGLQV SGGAFGSPRG TAAGFRAGFC  360
SLPTTPTGTS GALGWFDGAD AGYAGGKEPV ERVESGRALR AKMFEKLSKE CVLERADGAP  420
SLPAPDVGWV SELVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.17e-93C3H family protein