PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW05791.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 20321.8 Da PI: 9.6524 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.5 | 3e-17 | 43 | 91 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr +k +g+WvAeIr+p +kr r++lg++ ta Aa+a++ a +l+g RWW05791.1 43 FRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYSTAVAAARAYDTAVYCLRG 91 8*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MEGQLCSTST SGEPRKPPPP ATGRRVAGGS EGGGGGGGRD RPFRGVRMRK WGKWVAEIRE 60 PNKRSRIWLG SYSTAVAAAR AYDTAVYCLR GRSARLNFPD EILAEDLEAE SFSGSAGAGA 120 CAMSAASIRK KATEVGARVD ALQTGLISSP PPQQLGGGHQ LQLQLQLQQP PTRPAKNPDL 180 NQEPIPESSD VD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46768.1 | 2e-26 | ERF family protein |