PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW05467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 278aa MW: 30429.2 Da PI: 8.5022 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.1 | 6e-20 | 108 | 156 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr+++ +g+WvAeIr p++ r+r++lg+f+tae+Aa a++ a+ kl+g RWW05467.1 108 FRGVRQRH-WGKWVAEIRMPRN---RTRVWLGTFDTAEDAAMAYDMAAYKLRG 156 8******9.**********955...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MEDQFPFVRG SIEFNGVKVP PSDLQHSHRS SSSSSVLSFL NPRTPLPSSS SVSTAAAAAA 60 SESPNVATFL VQKQRHHESD IAGCLQCSVS CNMIEFCSTR ERRPTKLFRG VRQRHWGKWV 120 AEIRMPRNRT RVWLGTFDTA EDAAMAYDMA AYKLRGDSAY LNFPHLKHDL HELGSPHLHS 180 SVASLLEAKL NALCNSSSSS SSSSSCKQKK AGKDDKSAVA SITRTPCKEG LRSDQGRREA 240 PQKELTSGGD AEGVLLSRMP SLDMDMIWDS LPMSAAET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13620.1 | 9e-38 | ERF family protein |