PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW04976.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 251aa MW: 28977.8 Da PI: 8.2248 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.8 | 1.2e-18 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ll++ v+++G g+W+++++ g++R++k+c++rw +yl RWW04976.1 29 KGPWTPQEDKLLIEHVNLHGEGRWNSVSELSGLRRSGKSCRLRWVNYL 76 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 30.9 | 6.3e-10 | 82 | 122 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ +++++++ W+tIar ++ gRt++++k++w+ + RWW04976.1 82 KGKITPEEENVILELHAL-----WSTIARSLP-GRTDNEIKNYWRRH 122 678899999999998886.....99*******.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MCHYGGDRQR LAAMERYFEA VTVEDGWRKG PWTPQEDKLL IEHVNLHGEG RWNSVSELSG 60 LRRSGKSCRL RWVNYLRPDL KKGKITPEEE NVILELHALW STIARSLPGR TDNEIKNYWR 120 RHFKKSKPSK NIEKARARFL RQQQQQQQQH QAVPPPPPPP QQQDDMRTIM NQVAQITLAQ 180 EMQQEMAYMY PLPYALQQQG GAAHGCVVDG PAAAAEDASW GSLWNLDDVH HDAERVCRGC 240 LQVQDQVLTF Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 5e-60 | MYB family protein |