PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW04169.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 27201.5 Da PI: 10.0973 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.2 | 2.7e-20 | 99 | 148 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +grW+AeIrdp++ rkr++lg+f+taeeAa ++ a+ +l+g RWW04169.1 99 KFRGVRRRP-WGRWAAEIRDPRQ---RKRVWLGTFDTAEEAATVYDMAAVRLKG 148 89*******.**********954...5***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MDRREELKFS EHVVKTRKTI PAKRAASRGS ACRKRVVRIH FEDVDATDSS SSDGECGARR 60 LVRRQVHEIG IEVVPVPRRG AAVKRKETAA GGGESGRRKF RGVRRRPWGR WAAEIRDPRQ 120 RKRVWLGTFD TAEEAATVYD MAAVRLKGSK AVTNFPAARP AAGTTEEEAV KCEVRGGGVT 180 GSLSSPTSVL HYGDEWAPVD FTGNAEVDPF GLGADASPLF FTEYYRPTRR LWQAEFGDFD 240 AEDFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 5e-28 | ERF family protein |