PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW04064.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | C3H | ||||||||
Protein Properties | Length: 106aa MW: 12058.8 Da PI: 6.3356 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 31.9 | 2.2e-10 | 66 | 91 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ++++ C +++rtG C +G++Ck++H+ RWW04064.1 66 PGEPDCLHYLRTGKCGFGSKCKYHHP 91 5789*********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MMPDTRHDAV SSSSNALPHK LEGLFRFLDE IKWFWGFMMA EAMWQLKIED GQEAADGQLI 60 PYPDRPGEPD CLHYLRTGKC GFGSKCKYHH PASGVQVRDL GCNIFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02830.1 | 3e-14 | C3H family protein |