PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03367.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 321aa MW: 35336.4 Da PI: 5.1547

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.3	2e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grW+++Ede+l ++++ G g+W++ ++ g+ R++k+c++rw +yl RWW03367.1 14 KGRWSADEDEILGKYIAANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	57	4.5e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+e++v++++ lG++ W++Ia +++ Rt++++k++w+++l RWW03367.1 67 RGNFTKEEEEIIVKLHATLGNR-WSLIAGHLP-ARTDNEIKNYWNSHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MGRAPCCAKV GLKKGRWSAD EDEILGKYIA ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRSGLKRGNF TKEEEEIIVK LHATLGNRWS LIAGHLPART DNEIKNYWNS HLSRKLQGFQ 120 QNGLDVGGAA VVDLSKLPGG VRRHDGRTSR TTTTTEKNNK NGTTRREKQE MVVVRPPASL 180 AQSEEGHSLV LHADQSQASS ACTFDGNTNE GLIDPNEEMV SELLCASAME SILVGPSEDT 240 IVGWGSHDGD SGVIGGTTVE ELVQSQVDKF LDWDMEGMQA KLWDEAGEMW PWMWDSESRE 300 LGLHGVDDSG SREESPDGWL T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	1e-70	MYB family protein