PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW03288.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 23377.3 Da PI: 8.6112 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56 | 1e-17 | 40 | 89 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGVr+++ +g+Wv+eIr p + ++r++lg++ t+e Aa+a++aa ++l+g RWW03288.1 40 PYKGVRRRS-WGSWVSEIRAPLQ---KTRIWLGSYSTPEAAARAYDAALLCLKG 89 59****887.**********743...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MGKSSRVLRP PNSSVDPLLR CSSSSSSSPC RSMGTGGKRP YKGVRRRSWG SWVSEIRAPL 60 QKTRIWLGSY STPEAAARAY DAALLCLKGS SASFNFPASL PSHLPASAMS PKSIQRVAAA 120 AAAAAAAAAA AAVATSPAAS TTTSQSPSPP PPPSPSLDAT NDDHQSTMTC SATSMRSAEI 180 DEPWIDLGAF QSPRCMDHTI NPLISSWQEC EEMGDINLWS FF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-26 | ERF family protein |