PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW02858.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 275aa MW: 30806.7 Da PI: 8.7165 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51 | 3.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ll d++ +G g+W++ ++ g++R++k+c++rw++yl RWW02858.1 14 RGAWTSEEDKLLSDYIFAHGLGRWRSLPANAGLNRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.8 | 1.1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+ T+eE++l+++++++lG++ W++Ia +++ gRt++++k++w++yl RWW02858.1 67 KGNITQEEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNTYL 112 6899******************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MRKASCCPKE GLNRGAWTSE EDKLLSDYIF AHGLGRWRSL PANAGLNRCG KSCRLRWLNY 60 LRPDIKKGNI TQEEEDLIIR LHNLLGNRWS LIAGRLPGRT DNEIKNYWNT YLRKKGLHSS 120 PSPASKNREV QTVQTVTDKQ KGVEVNVIRT KAIRCTKSLF ADEVPARGMN NSAYSVLPSA 180 IFDYDTSGFS GHDPAPQAAK RVCSEGNMQN SVFSQAADGF YTSSGSFHHD SFSATASSSY 240 FNYTKICSNV LEKGEELHPF MCDDEWVSLL MPPNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 8e-65 | MYB family protein |