PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW02247.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 295aa MW: 31988.2 Da PI: 7.8535 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.9 | 1.5e-10 | 14 | 45 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd +lv +++++G+g+W+++++ g RWW02247.1 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPANTG 45 79*************************98766 PP | |||||||
2 | Myb_DNA-binding | 48.4 | 2.2e-15 | 94 | 139 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E +++++ ++lG++ W++Ia++++ Rt++++k++w+++l RWW02247.1 94 RGNFTDQENRIIIHLQALLGNR-WAAIASYLP-QRTDNDIKNHWNTHL 139 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MSTPTCSEEV GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PANTGDLGCF IVFIQSSLVQ 60 PLTCSCVLCL PGLMRCSKSC RLRWTNYLRP GIKRGNFTDQ ENRIIIHLQA LLGNRWAAIA 120 SYLPQRTDND IKNHWNTHLK KKVRKVEADG NGPKPSSISR GKWERCLQTD IHKARRALCE 180 ALLIEKPADC ASDDSSRTAY ASSAENISRL LKGRTGNPPG ATGAADLAST TTQADSASSS 240 QGTASTSNSA VARQPSSCQT PFTLLESWLL VEETVAQGPE NLLGMAMDDA GGDLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28910.1 | 2e-80 | MYB family protein |