PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02144.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 539aa MW: 59239.4 Da PI: 7.0791

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02144.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45	2.4e-14	143	204	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..............TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..............kgRtlkqcksrwqkyl 48 +g W++eEde+lv+ ++++G g+W+++++ g + R++k+c++rw +yl RWW02144.1 143 KGLWSPEEDEKLVRHINKYGHGCWSSVPKLAGestaltckrleqecLQRCGKSCRLRWINYL 204 678*********************************************************97 PP
2	Myb_DNA-binding	50.2	5.8e-16	210	253	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++d+++ lG++ W+ Ia+ ++ gRt++++k++w++ RWW02144.1 210 RGTFSQQEEDLIIDLHAALGNR-WSQIAAQLP-GRTDNEIKNYWNS 253 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MGTPTWAFIP SPAPISPVGV AGPADRNGVV SSSSSESEWP RETPPTPAYP IRRATGSRVG 60 YDATGDGGRC AFFPSDTGLH GTSAVASFYG RRKESTATTS SSFKLSTKPA ELIFSGSVTR 120 RHCTGAALWM GRHACCYKQK LRKGLWSPEE DEKLVRHINK YGHGCWSSVP KLAGESTALT 180 CKRLEQECLQ RCGKSCRLRW INYLRPDLKR GTFSQQEEDL IIDLHAALGN RWSQIAAQLP 240 GRTDNEIKNY WNSCIKKKLR QRGIDPSTHK PLGESDGRED RETTNREKTP GSRNPQLLAP 300 ASVVAEPTPP LMGTGVSEDP VMPTKELFVD QLVSSRHESP SSTRYAPLQQ SNYVACCDAN 360 GNRPIGPPIQ PTPPLWFTHD ARLLNADAEL CHVMLPSGVP SIPTSMLSSS AELKPMISLP 420 PDSNNSTNSA DSSNELELQS SGTLFDSGIF QWLELLPNKG QIQFDTEPED LKWSEYLNGT 480 IATTTTNQSQ GQSLFGVTKE ESQVRVNGLN SWCEEQQLHP PDLYGKDLHQ IIPAQPERI

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MGTPTWAFIP SPAPISPVGV AGPADRNGVV SSSSSESEWP RETPPTPAYP IRRATGSRVG  60
YDATGDGGRC AFFPSDTGLH GTSAVASFYG RRKESTATTS SSFKLSTKPA ELIFSGSVTR  120
RHCTGAALWM GRHACCYKQK LRKGLWSPEE DEKLVRHINK YGHGCWSSVP KLAGESTALT  180
CKRLEQECLQ RCGKSCRLRW INYLRPDLKR GTFSQQEEDL IIDLHAALGN RWSQIAAQLP  240
GRTDNEIKNY WNSCIKKKLR QRGIDPSTHK PLGESDGRED RETTNREKTP GSRNPQLLAP  300
ASVVAEPTPP LMGTGVSEDP VMPTKELFVD QLVSSRHESP SSTRYAPLQQ SNYVACCDAN  360
GNRPIGPPIQ PTPPLWFTHD ARLLNADAEL CHVMLPSGVP SIPTSMLSSS AELKPMISLP  420
PDSNNSTNSA DSSNELELQS SGTLFDSGIF QWLELLPNKG QIQFDTEPED LKWSEYLNGT  480
IATTTTNQSQ GQSLFGVTKE ESQVRVNGLN SWCEEQQLHP PDLYGKDLHQ IIPAQPERI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	6e-82	MYB family protein