PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW02056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | C3H | ||||||||
Protein Properties | Length: 158aa MW: 16888.2 Da PI: 8.5887 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 36.2 | 1e-11 | 53 | 77 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +++C f++r+G+Ck+G CkF H++ RWW02056.1 53 EPICIFYSRYGICKFGTHCKFDHPM 77 689********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MRVQTQTRVC SINCQAIAAA RIKGGYPERV GQPECEPNTV VSLRGSSVYP GEEPICIFYS 60 RYGICKFGTH CKFDHPMAAP MGIYAYGLAT SSLTDVAAAR NLLVTSSGPP SFQAPLEVAT 120 GKSRRLLFAD SLQIASSDER IKSEGSQATS SNGKLSSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02830.1 | 3e-17 | C3H family protein |