PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW01902.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 688aa MW: 76052.7 Da PI: 8.5145

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW01902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	7.1e-17	263	310	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ede+l++ + ++G g+W+++++ g+ R++k+c++rw +yl RWW01902.1 263 KGLWSPDEDEKLIKHISKHGHGCWSSVPKQAGLQRCGKSCRLRWINYL 310 678*******************************************97 PP
2	Myb_DNA-binding	39	1.9e-12	316	392	1	46
TSSS-HHHHHHHHHHHHHTTTT................................-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg................................tWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++++++ lG++ +W++Ia +++ gRt++++k+ w++ RWW01902.1 316 RGTFSQQEEDLIIQLHAVLGNRykplclfspsgfhvqrglafsdaasplflianRWSKIAVHLP-GRTDNEIKNLWNS 392 899***********************************************************.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MVGHRTRKWG LCGHRPSTGW PLALSLQPGS RQASPLWAGR GWALPLQPGR RLWVVALAAP 60 YGLAMGGRPY RGPGYGWPPL KRAWLWPPAP FPCCSPALLV AEEEKDLVAV EEGVSVAAWR 120 RREKPRRTSN DGATGKQGTV GDEDEKAETE EREVRVLTLK VDGKEEVVLD LYGYDRGSGK 180 KEESTKGHDW RGSAGYRQRR EEGEDDAGVA TMTNVEMQVL PTLERKKREG ERERKGLVSE 240 KIPLWFFRQM GGHSCCYKQK LRKGLWSPDE DEKLIKHISK HGHGCWSSVP KQAGLQRCGK 300 SCRLRWINYL RPDLKRGTFS QQEEDLIIQL HAVLGNRYKP LCLFSPSGFH VQRGLAFSDA 360 ASPLFLIANR WSKIAVHLPG RTDNEIKNLW NSCIKKKLRQ RGIDPITHEP LAEVDGSGDK 420 APINSEKNNS GSSGLQIPAN AKLTMHVGKS VDESTASKSS STPTKEFLLD QLLATHESPS 480 TCRSSNPTSY FSLPLLSFAP DYTRGQITSA APPISSKPLL WSNQTARQLD ANPELSCNAM 540 PNILSTLAVD PPICEGGDSV SNWYSGNCSN SRCTSAVNDS GGVMLQSSCS YDSGIFPWSE 600 LTPDKDVQVQ IGGETEDLRW SEYLHGAFPA SSAMPTQSQP LFGDKIKSES QFTFHGFSTW 660 HKTRQLQPQL PPSDTSGNDF QSVSAGFE

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MVGHRTRKWG LCGHRPSTGW PLALSLQPGS RQASPLWAGR GWALPLQPGR RLWVVALAAP  60
YGLAMGGRPY RGPGYGWPPL KRAWLWPPAP FPCCSPALLV AEEEKDLVAV EEGVSVAAWR  120
RREKPRRTSN DGATGKQGTV GDEDEKAETE EREVRVLTLK VDGKEEVVLD LYGYDRGSGK  180
KEESTKGHDW RGSAGYRQRR EEGEDDAGVA TMTNVEMQVL PTLERKKREG ERERKGLVSE  240
KIPLWFFRQM GGHSCCYKQK LRKGLWSPDE DEKLIKHISK HGHGCWSSVP KQAGLQRCGK  300
SCRLRWINYL RPDLKRGTFS QQEEDLIIQL HAVLGNRYKP LCLFSPSGFH VQRGLAFSDA  360
ASPLFLIANR WSKIAVHLPG RTDNEIKNLW NSCIKKKLRQ RGIDPITHEP LAEVDGSGDK  420
APINSEKNNS GSSGLQIPAN AKLTMHVGKS VDESTASKSS STPTKEFLLD QLLATHESPS  480
TCRSSNPTSY FSLPLLSFAP DYTRGQITSA APPISSKPLL WSNQTARQLD ANPELSCNAM  540
PNILSTLAVD PPICEGGDSV SNWYSGNCSN SRCTSAVNDS GGVMLQSSCS YDSGIFPWSE  600
LTPDKDVQVQ IGGETEDLRW SEYLHGAFPA SSAMPTQSQP LFGDKIKSES QFTFHGFSTW  660
HKTRQLQPQL PPSDTSGNDF QSVSAGFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	2e-73	MYB family protein