PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW01822.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 305aa MW: 33624 Da PI: 6.8341

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW01822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.9	3.1e-15	48	95	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+lv + G +W+++++ g+ R++k+c++rw +yl RWW01822.1 48 KGPWSAEEDEKLVSFILANGHCCWRAVPKLAGLLRCGKSCRLRWTNYL 95 79****************************99**********97 PP
2	Myb_DNA-binding	37.3	6.5e-12	105	167	5	47
-HHHHHHHHHHHHHTTTT.....................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGgg.....................tWktIartmgkgRtlkqcksrwqky 47 + E+ l +d++++lG++ +W++Ia++++ gRt++++k+ w+++ RWW01822.1 105 SDAEETLVIDLHARLGNRfslllhfftvfacavpvehscRWSKIAAMLP-GRTDNEIKNLWNTH 167 778********************************************.*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MAMACLQREI EQGGGRCFKY QGLVGARGRG GGSGMGRRPC CDKLGVKKGP WSAEEDEKLV 60 SFILANGHCC WRAVPKLAGL LRCGKSCRLR WTNYLRPDLK RGLLSDAEET LVIDLHARLG 120 NRFSLLLHFF TVFACAVPVE HSCRWSKIAA MLPGRTDNEI KNLWNTHIKK KLLRRGIDPV 180 THQLLDRQTS PAASQSTVTT DSKSDADQFQ SPGNQGHIPS SDNKNPAEAS SSAGGADPRL 240 MNCLWEDDAP VLLEELWQLP GNEDNYGAIA AAGQMPWDDE GSCEWLLDYQ DFGEGDVGSE 300 NLPRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	8e-73	MYB family protein