PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW00970.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | C3H | ||||||||
Protein Properties | Length: 359aa MW: 38532.5 Da PI: 8.1038 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 24.7 | 4e-08 | 104 | 128 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt+lC+ f++ GtC+y +C+FaHg RWW00970.1 104 FKTKLCCKFRA-GTCPYITNCNFAHG 128 69*********.*************8 PP | |||||||
2 | zf-CCCH | 23.8 | 7.9e-08 | 175 | 200 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 yk ++C+ f+ C+yGd+C+F+H+ RWW00970.1 175 YKGRRCKKFYTEEGCPYGDSCTFIHD 200 899**********************7 PP | |||||||
3 | zf-CCCH | 38.8 | 1.5e-12 | 236 | 261 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt+ C+ + tG+C++G++C+FaHg RWW00970.1 236 WKTRTCHKWEMTGYCPFGNKCHFAHG 261 8************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MDYGGGAAYP GSNAIAIIPD ASGPPHSWPP GGNDQPMWAT DEDYRSWSGD PSADAASNSA 60 YDGRLSRSRA GSEQPPGKKG RNSQADSQGG SRTTSSKAIG KMFFKTKLCC KFRAGTCPYI 120 TNCNFAHGIE ELRRPPPNWQ EIVAAQEEGS SEPREERRIP TMNPLGVAGE SERSYKGRRC 180 KKFYTEEGCP YGDSCTFIHD EQSKARESVA ISLSPMVGGG GLGGGANAPT QKPSNWKTRT 240 CHKWEMTGYC PFGNKCHFAH GAAATELHRY GGGPVETEGR DASSAVSDSK HGGVHTKFPP 300 SDASVASNSS VPHADTYHIG VPSQRSAGVI QRQGQRSIGK WKGPDKISKI YGDWIDDIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32360.1 | 1e-109 | C3H family protein |