PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV98661.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 397aa    MW: 42809.7 Da    PI: 6.5042
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV98661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.26.8e-09131152426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 + C++f++ G Ck+Gd C FaHg
  RWV98661.1 131 AACPDFRK-GGCKRGDACEFAHG 152
                 78******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MMIGGEGGHH SDPTGHVPPW SSPFEDSTGG IGYHLGAAGG GEYGLGESAL AAALQRYLPC  60
NMDEQGALEE EEVDEPDAAV DVYSSDEFRM YEFKVRRCAR GRSHDWTECP FAHPGEKARR  120
RDPRKYHYSG AACPDFRKGG CKRGDACEFA HGVFECWLHP ARYRTQPCKD GTACRRRVCF  180
FAHTPDQLRV LPQQQQQQQT PTKAAAVVES YDGSPLRHQA IESYLSKHLM SSSPTSTLIS  240
PPISPPSDSP PMSPSTAAIR RASWPMRSSL NEVVASLRQL QLNKVKSDLS SWGLQVGGGP  300
FGSPRGSGAG FRAGFCSLPT TPTTATAAVS GGGVGWFDGV DSGFTEGEEP VERVESGRAL  360
RAKIFEKLSK ECVTERADAA AASTPAPDVG WVSELVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.17e-87C3H family protein