PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV98379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 121aa MW: 13231.7 Da PI: 7.415 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.6 | 2.3e-21 | 17 | 68 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+++AeIrd ++ g +r++lg+f+taeeAa+a+++a+ +++g RWV98379.1 17 TRYRGVRRRP-WGKYAAEIRDSTQHG--ARVWLGTFDTAEEAARAYDRAAFAMRG 68 68********.**********65554..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MADSGATGGG DKDGEQTRYR GVRRRPWGKY AAEIRDSTQH GARVWLGTFD TAEEAARAYD 60 RAAFAMRGSL AVLNFPADAR AYAAGSSRGG SKQVIELECL DDKVLDEMLE FAEKEKGCKH 120 K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G04370.1 | 3e-31 | ERF family protein |