PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV97777.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB_related
Protein Properties Length: 284aa    MW: 31189.3 Da    PI: 6.0463
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV97777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.42.1e-155095148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg++T +E+ l++++ ++lG++ W++Ia++++  Rt++++k++w+++l
       RWV97777.1 50 RGNFTDQEERLIIHLQALLGNR-WAAIASYLP-ERTDNDIKNFWNTHL 95
                     89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MFHELRCLDL KGFRDLIESF VLFFLRPGLM RCSKSCRLRW TNYLRPGIKR GNFTDQEERL  60
IIHLQALLGN RWAAIASYLP ERTDNDIKNF WNTHLKKKLR KIQGGEDDGT MNAGLSANYY  120
PFSKGLWERT VQTDIHMAKQ ALGEALSLQK PHAGASSAAT TTYASSTENI SRLLEGWMNN  180
SAKTRTASAS DMVGGAGSAS TEGSATMASK SADVSPEGLD SLFKMETSTP EASDSSLFQG  240
QIKLATEAPI PISLLETWLF DETIEQGGAC PVDLPLCDAA AELL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.13e-60MYB family protein