PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV97308.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | C3H | ||||||||
Protein Properties | Length: 237aa MW: 25869.2 Da PI: 9.2229 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 22.4 | 2.2e-07 | 43 | 65 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 +lC++f+r+G C++G++C aHg RWV97308.1 43 SLCPDFRRGGGCRRGESCDLAHG 65 79****************88887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
RMYEFKVRRC PRGRSHDWTE CPYAHPGEKA RRRDPRRFHY SGSLCPDFRR GGGCRRGESC 60 DLAHGVFETW LHPARYRTQP CKDGAACRRR VCFFAHSPEQ LRVLLPPSPT SPGKGGARVS 120 SSPTSTLALA PMSPPSDGSS PPVSPVGLDE VIQAMSNLHL SKVRSRPPFG ARRSAAALGS 180 APLVAEVAVA NAWGAAAAAA AWGSRSKLLE CWRRQEEEEE AAEAVPDLGW VTDLVND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G19810.1 | 4e-55 | C3H family protein |