PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV95482.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 317aa    MW: 34449.6 Da    PI: 9.4883
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV95482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.11.5e-08107128426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 ++C++f++ G C yG++C+F H+
  RWV95482.1 107 RICHYFLA-GNCTYGENCRFLHS 128
                 68******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MAMDADGRNG NKRFHQRLAP PDRANNKVCY HWRAGRCNRH PCPFLHSELP PHQQQQSVAP  60
DGGAVAKRNN VWRNPGTASA ASGPPSKWGK GRGGGAVGRP PGRASDRICH YFLAGNCTYG  120
ENCRFLHSWF ISDSFSLLTP LQGHQKGCLQ AVSGIALPSG SDKLYSGSMD ESVRAWDCQT  180
GQAWNTQTAT ELSLDGPSGQ VYSLVVGNEF LFAGTQCYSL PHVNQPQMTS KFGAKIQTYP  240
ENPGMGGSLV GTGGAAAKST LKTGYGWFNR RQLPENLCGG GTIVAQWRFN CRNFRKSDSL  300
HFSNFDLNLI LTNSLVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.14e-57C3H family protein