PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV95419.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 283aa MW: 32216.2 Da PI: 6.8335

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV95419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.3	1.1e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++ Ed++l d+vk +G g+W + +++ g++R++ +c++rw++yl RWV95419.1 15 KGCWSATEDKILTDYVKAHGDGRWGKLPKRAGLNRCPRSCRLRWLNYL 62 799*******************************************97 PP
2	Myb_DNA-binding	51.2	2.9e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWV95419.1 68 RGNISHEEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNTVL 113 78999***************.*****.**********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MHGNPSCRSN KSFNKGCWSA TEDKILTDYV KAHGDGRWGK LPKRAGLNRC PRSCRLRWLN 60 YLRPDIKRGN ISHEEEDLII RLHNLLGNRW SLIAGRLPGR TDNEIKNYWN TVLRKKVKAC 120 SVGSMKTMHS DKDEDGSSFK RQEKVKCPES ENSTSWAGAS VSSQHDDKNI CKKESKKTVV 180 SGEPHLDTTY FLGPEDCEHP VMAEESCTKQ HPLDIDFSEF FGHNLQKDMR IWGIVDAPLS 240 PDDDLMFFSN RVSDTWFDGD DIQLCGGINL ESFFPSESEF LGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	5e-55	MYB family protein