PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV94969.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 384aa MW: 41941.8 Da PI: 8.0418

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV94969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.3	2.1e-06	339	365	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR++i +++ L++l+P + RWV94969.1 339 SHSLAERVRREKISQRMKLLQDLVPGC 365 8************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
IVALCRAEIF RPCHNPNSTS GAPRLTSGIG NLGEFTLLPL FGAQLQKRRD LFCIADLAEM 60 NSGSSDRTPG CFLNQNWERS VDHISQFGSF MSPQSSSELE RGLQRLDHLS EEILPQSHFM 120 DSSGNSQALG GLVIAGNRAL AHLDQFPADP GFAARAARFS SFDGQSYGWF SGHFELPESG 180 KPSTAAIIQS LTASGLQIGH LECNRQIPVS DGLQSKMNSA GPAISREETS LSDPISASNA 240 KKRKAPSRSR EKGAASPKPS TDPPKVADEE DSDTKRCRSS EKTHEIGIDN VKPKLEQNDG 300 ARSNGNDEQK QRKEGNDKPC EPPKDYIHVR ARRGQATDSH SLAERVRREK ISQRMKLLQD 360 LVPGCSKVTL DLKHALLTPV KHNE

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

IVALCRAEIF RPCHNPNSTS GAPRLTSGIG NLGEFTLLPL FGAQLQKRRD LFCIADLAEM  60
NSGSSDRTPG CFLNQNWERS VDHISQFGSF MSPQSSSELE RGLQRLDHLS EEILPQSHFM  120
DSSGNSQALG GLVIAGNRAL AHLDQFPADP GFAARAARFS SFDGQSYGWF SGHFELPESG  180
KPSTAAIIQS LTASGLQIGH LECNRQIPVS DGLQSKMNSA GPAISREETS LSDPISASNA  240
KKRKAPSRSR EKGAASPKPS TDPPKVADEE DSDTKRCRSS EKTHEIGIDN VKPKLEQNDG  300
ARSNGNDEQK QRKEGNDKPC EPPKDYIHVR ARRGQATDSH SLAERVRREK ISQRMKLLQD  360
LVPGCSKVTL DLKHALLTPV KHNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48560.1	2e-27	bHLH family protein