PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV94691.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 286aa MW: 31815.6 Da PI: 6.8243 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.4 | 1.6e-13 | 67 | 109 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +lv +++++G+g+W++++ +++k++w+++l RWV94691.1 67 RGPWTQEEDTILVSYIQKHGPGNWRLVPVNTD-----NDIKNYWNTHL 109 89************************887666.....********996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MLITVQVSEK TGSDAIVSHA QFRDAWDPDP YPLTPGATVD PFPNPPTRRQ GRRMGRSQCC 60 DKVAIKRGPW TQEEDTILVS YIQKHGPGNW RLVPVNTDND IKNYWNTHLK KKIEKHQLPT 120 SGCTAASSDP TNVCPELMIS RCHNNSGSGN PCHSDLPSSD LSSSSYASST HNISRLLQGW 180 TRCPPMVKPT APDQHLTCHG IHTKVDRESC HPLFNEELKR LLPPAWEEEQ PSFYGSQSTP 240 ACADGNKRFD TQNPPLAALE NWLLDEAARH VDLSVGYIDS ISHAFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08810.1 | 8e-20 | MYB family protein |