PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV94586.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 238aa MW: 26527 Da PI: 8.1628 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.6 | 8.1e-10 | 14 | 51 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv ++k +G g + R++k+c++rw +yl RWV94586.1 14 KGAWTKEEDEKLVSYIKAHGEG----------LLRCGKSCRLRWINYL 51 79******************99..........689***********97 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.7e-17 | 57 | 106 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ lG++ +W++Ia +++ gRt++++k++w+++ RWV94586.1 57 RGNFTEEEDELIIKLHGVLGNKyvisQWSLIAGRLP-GRTDNEIKNYWNTH 106 89**********************************.************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDEKLVSYIK AHGEGLLRCG KSCRLRWINY LRPDLKRGNF 60 TEEEDELIIK LHGVLGNKYV ISQWSLIAGR LPGRTDNEIK NYWNTHIKRK LLGRGIDPQT 120 HRQILQLPET AMLQDMAAAV QAPAEYSSSD DANCGGASQD DVRYIDLNLD LSISLPHHSP 180 KRAHPSQALS SAATSGYSPS PICLCRHLGF QGSEACSCRS TTHPNVLRVI RPLEEAQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38620.1 | 1e-76 | MYB family protein |