PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV94242.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB_related
Protein Properties Length: 437aa    MW: 46828.9 Da    PI: 4.3039
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV94242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.6e-0997125129
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                      r++WT+eEd  l+ +v+++G g+W+ I +
       RWV94242.1  97 RKPWTKEEDMELIAGVQKFGEGNWANILK 125
                      789***********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MIILKYAVCD QVLISCGVPR EQGLTSRAAI ETPLAVNGFN DQALRISSDK QQLSQSNYGT  60
DITVPTLQKQ PLSTGTSAEG LDGNGMAGPS IAPKKRRKPW TKEEDMELIA GVQKFGEGNW  120
ANILKGDFKH NRTASQLSQG GALLHLPLLP LCSKLHNHIR PGGGARPSPI NNVKTLAVTN  180
STGLQPTGVR ISRPSVMGGP PAANPVSVSS GTKYGCQQVQ GCSGRVGSNP LNTTSTNQQV  240
IIESNSGEVS HEMTEQKGDI DISSIDVDEL LAEEVKCVDE MELDGTMSRD DQMDLLSLDT  300
NTNEDNDFNN TYGAQASMDK QMNPPDSVVA ENIIMENNVV FSDVEAAESK ALEVDDNDDQ  360
ILLEKGTASF TGEQNKISPV GNLNAQDHQL IGEEVMADRD RESCTNGQQH ALPEDTATGS  420
KIPVDDDSIS SNNKEVE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19399PKKRRKP
29498KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.11e-21MYB_related family protein