PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV94228.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 372aa MW: 41797.7 Da PI: 6.0284

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV94228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.8	5.2e-20	161	214	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe ++++ e++ eLA+klgL+ rqV vWFqNrRa++k RWV94228.1 161 KKRRLTTDQVHLLERSFEAENKLEPERKSELARKLGLQPRQVAVWFQNRRARWK 214 56789************************************************9 PP
2	HD-ZIP_I/II	131.5	3.2e-42	160	251	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+++qv+lLE+sFe+e+kLeperK+elar+LglqprqvavWFqnrRAR+ktkqlE+d+++Lk++y++l +++++L ke+++L++++ RWV94228.1 160 EKKRRLTTDQVHLLERSFEAENKLEPERKSELARKLGLQPRQVAVWFQNRRARWKTKQLEQDFDRLKSSYNSLLSDHDSLLKENDRLHSQVI 251 69**************************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
PRSFSTAKTR RKQRRLLAAA GNLELRLASS PYSSFKVGAA GLEAVGTPWL RSPHDGVFSL 60 PDEGVDAAPL EYLLLPPQDL CRRLPLNRPR SHPSIDSVCI DIAPRGYCYH WLIEVLRGIF 120 GIKGAAISAL AEGANKRRPF FTSPDEILEE EYYYDEQLPE KKRRLTTDQV HLLERSFEAE 180 NKLEPERKSE LARKLGLQPR QVAVWFQNRR ARWKTKQLEQ DFDRLKSSYN SLLSDHDSLL 240 KENDRLHSQV ISMTETLKNK AAALTAAAAA SVNDPASLGV PKKAEDRLST GSGGSAVVDA 300 NQLVYSSEES CLPEGYHCMG PVDGPVHSEE DDASDEGCNY YSDGIFTAEH HHHQHQHQEE 360 EEDAQLGWWV WN

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

PRSFSTAKTR RKQRRLLAAA GNLELRLASS PYSSFKVGAA GLEAVGTPWL RSPHDGVFSL  60
PDEGVDAAPL EYLLLPPQDL CRRLPLNRPR SHPSIDSVCI DIAPRGYCYH WLIEVLRGIF  120
GIKGAAISAL AEGANKRRPF FTSPDEILEE EYYYDEQLPE KKRRLTTDQV HLLERSFEAE  180
NKLEPERKSE LARKLGLQPR QVAVWFQNRR ARWKTKQLEQ DFDRLKSSYN SLLSDHDSLL  240
KENDRLHSQV ISMTETLKNK AAALTAAAAA SVNDPASLGV PKKAEDRLST GSGGSAVVDA  300
NQLVYSSEES CLPEGYHCMG PVDGPVHSEE DDASDEGCNY YSDGIFTAEH HHHQHQHQEE  360
EEDAQLGWWV WN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	209	217	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	1e-54	HD-ZIP family protein