PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV93590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 22801.7 Da PI: 10.3096 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.3e-20 | 21 | 71 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrdp++ ++r++lg+f++ae+Aa+a++aa+ +l+g RWV93590.1 21 TRFRGVRKRP-WGRFAAEIRDPCK---KTRVWLGTFDSAEDAARAYDAAAVALRG 71 589*******.**********854...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MRKGRGQAAH PPAEVGGAAG TRFRGVRKRP WGRFAAEIRD PCKKTRVWLG TFDSAEDAAR 60 AYDAAAVALR GPKAKTNFPS LPSAFPPVPL PAAAAHFPFY HQHQHHPPPP PQRPTSSSHS 120 STVESFSGPR HPSAVAPIRL RPRIVRKQVN PRPPPRVLNG DDDCHSDCGS SSSVVDDDGD 180 IVSVCRQPLP FDLNLLPSSE DDFHVTALRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 3e-21 | ERF family protein |