PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV93016.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 371aa MW: 40129.1 Da PI: 9.347

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV93016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.1	1.1e-19	17	62	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G+++W++I++ ++ gR++k+c++rw + RWV93016.1 17 KGPWSPEEDEALQKLVQRHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 62 79****************************.*********985 PP
2	Myb_DNA-binding	56	8.8e-18	71	113	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++++G++ W+tIar + gRt++ +k++w++ RWV93016.1 71 PFTPEEDETIIRAHRRFGNK-WATIARLLS-GRTDNAVKNHWNST 113 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MAATVVGSRS KDVDRIKGPW SPEEDEALQK LVQRHGPRNW SLISKSIPGR SGKSCRLRWC 60 NQLSPQVEHR PFTPEEDETI IRAHRRFGNK WATIARLLSG RTDNAVKNHW NSTLKRRYCA 120 SSAAGDGGFR HHHDDNVVAA QPLKRTTSDG PALSSSGAGL CLSPGSPSAS ELSDSSHHSL 180 PMTSPVSTSS HIYRPVPRTG GVVLPTSSAL NPHQIEPSVV PTVAAPKSIN DPVTSLTLSL 240 PGSDQMDIPD NHHCTGDDSG SYKQLDLSPS VPMTLQARPP PAAERCADTA SAAVSPDKRK 300 RCAAAEEEAR PNARFPFSAE FLAVMQDMIR KEVRSYMTSL ERSGAACTQS RPPSESVRNA 360 AIKRIGVAKM E

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MAATVVGSRS KDVDRIKGPW SPEEDEALQK LVQRHGPRNW SLISKSIPGR SGKSCRLRWC  60
NQLSPQVEHR PFTPEEDETI IRAHRRFGNK WATIARLLSG RTDNAVKNHW NSTLKRRYCA  120
SSAAGDGGFR HHHDDNVVAA QPLKRTTSDG PALSSSGAGL CLSPGSPSAS ELSDSSHHSL  180
PMTSPVSTSS HIYRPVPRTG GVVLPTSSAL NPHQIEPSVV PTVAAPKSIN DPVTSLTLSL  240
PGSDQMDIPD NHHCTGDDSG SYKQLDLSPS VPMTLQARPP PAAERCADTA SAAVSPDKRK  300
RCAAAEEEAR PNARFPFSAE FLAVMQDMIR KEVRSYMTSL ERSGAACTQS RPPSESVRNA  360
AIKRIGVAKM E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	7e-82	MYB family protein