PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV92706.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 301aa    MW: 34278.3 Da    PI: 10.6582
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV92706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF54.21.9e-171152344
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                i n+s r+vtf kR+ g++KK +EL +LCd+++++i++++++
  RWV92706.1 11 IANDSTRKVTFKKRKRGLIKKVSELATLCDVKACLILYGTQD 52
                89*************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MARKKVKLAW IANDSTRKVT FKKRKRGLIK KVSELATLCD VKACLILYGT QDQHPSVWPS  60
FQEAARVLNE FRSMPEMEQC KKMMNQEDFL FLRIAKLQEQ FRKQDRENRE LETSLLMYEG  120
LAGRSLHDVG IEDATSLSWM VEMKTQLVYD RMEHLRKENL ASREVEPKMH VPQTVATEKT  180
PMQVAMEELQ RQNWFMEVGS TSDQKVKFGS GDEAARRRSG SHGQPPCRAA THGKATTKAP  240
CKGATGCGQV QPEREANGAY KRWQSPVGAA PAGRNVARRH GRLRLGRRGD SRLQRSAHKR  300
G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAWIANDSTRKVTFKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.13e-41M-type_MADS family protein