PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV92635.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | bHLH | ||||||||
Protein Properties | Length: 145aa MW: 15657.8 Da PI: 10.2897 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33 | 1.1e-10 | 93 | 123 | 1 | 31 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas 31 +r++h ++Er+RR+++N+ ++ Lr+l+P+++ RWV92635.1 93 QRMTHIAVERNRRRQMNEYLAMLRSLMPSSF 123 79**************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MALEAAAFRQ GLFGYACNEW CATGGGGGGA SGSGFGGLLE AEKRMGGGAD ETWDPSSCSC 60 SSSLAQHLQA KAGGRRKRRR AKSVKNREEV ESQRMTHIAV ERNRRRQMNE YLAMLRSLMP 120 SSFVQRVTGS SLRPSCHLAA YVVLV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 76 | 80 | RKRRR |
2 | 94 | 105 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22490.1 | 5e-20 | bHLH family protein |