PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV92588.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 216aa MW: 24588.1 Da PI: 10.1973 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63 | 4.3e-20 | 111 | 165 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t+eq++ Le+ Fe ++++ e++ eLA+klg++ rqV vWFqNrRa++k+ RWV92588.1 111 KKRRLTAEQVHLLERSFEAENKLEPERKGELARKLGMQPRQVAVWFQNRRARWKN 165 56789************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 129.6 | 1.3e-41 | 110 | 199 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 ekkrrl++eqv+lLE+sFe+e+kLeperK elar+Lg+qprqvavWFqnrRAR+k+kqlE+d+++Lk++y++l +++++L +e+++Lr++ RWV92588.1 110 EKKRRLTAEQVHLLERSFEAENKLEPERKGELARKLGMQPRQVAVWFQNRRARWKNKQLEHDFDRLKSSYNTLLADHDSLLRENDRLRSQ 199 69*************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MDSGRLIFHS SLSHGHHGQQ MILLGGGGGG PVFGGGFLCF FFRSCPRWFL LSCLGRLPGV 60 KLLRRGIFGI KGAGPALSAA EGASKRRPFF TSPDELLEEE YYYYDEQLPE KKRRLTAEQV 120 HLLERSFEAE NKLEPERKGE LARKLGMQPR QVAVWFQNRR ARWKNKQLEH DFDRLKSSYN 180 TLLADHDSLL RENDRLRSQA ISLSLSLSLS LSSIPR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 159 | 167 | RRARWKNKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 2e-51 | HD-ZIP family protein |