PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV92161.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 176aa MW: 19316.5 Da PI: 5.6071 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 58.5 | 2.3e-18 | 12 | 80 | 51 | 128 |
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++++ wyfF++r++ + a +sgyW++ g+d+ v+s ++++vg+k+tL +y g+ p+g +t+W+mheyrl RWV92161.1 12 FQGGNRCWYFFTSRSEDK--------ASASGYWNQVGTDEVVTS-GNKDVGVKTTLKYYIGQPPDGIRTNWLMHEYRL 80 56677899****998754........5689********999999.999****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MYVVCVLLGK AFQGGNRCWY FFTSRSEDKA SASGYWNQVG TDEVVTSGNK DVGVKTTLKY 60 YIGQPPDGIR TNWLMHEYRL LDAAVHGGSS ICSSTRRKRG QPVTISSSSS SSSSALVANT 120 SLFHYTAQEF NKWVICRVQE YCSQASAHDD GGGTELSCLD EVFLSLDDLD EVSLPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 6e-30 | NAC family protein |