PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV91405.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 298aa MW: 34659.5 Da PI: 8.0741

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV91405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	62	105	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W ++Ed++lv+ v ++G ++W+ Ia+ g R + ++rw +y RWV91405.1 62 KGPWGEQEDLQLVRIVGLFGDRRWDFIAKVSG-LRGE--DRLRWVNY 105 79***************************999.3322..36666666 PP
2	Myb_DNA-binding	49	1.4e-15	112	184	1	48
TSSS-HHHHHHHHHHHHHTTTT..........................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..........................tWktIartmgkgRtlkqcksrwqkyl 48 rgr T++E+ l+++++ ++G++ +W++Iar+++ gRt++++k++w++++ RWV91405.1 112 RGRITPQEERLILELHSRWGNRsdtssersiklpslpmhhmhnvlilyRWSRIARKLP-GRTDNEIKNYWRTHM 184 89******************************************************.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MAYHVIVPFH HPVVLAVRRA STDKRCRSYL CQQFIKRSEV VGRAVEELRE KQQEIDKMAM 60 RKGPWGEQED LQLVRIVGLF GDRRWDFIAK VSGLRGEDRL RWVNYLHPDL KRGRITPQEE 120 RLILELHSRW GNRSDTSSER SIKLPSLPMH HMHNVLILYR WSRIARKLPG RTDNEIKNYW 180 RTHMRKKAQE RKRKPCPSSS SSSLTCISAA QSELPTEVVA ESSSTSALGE ISDDAVEGYS 240 MDQIWNEIAM PDMISGLSFG ECKDEVYDSL CSAIPSPMWE YCSYPLWKMD DEDFQAYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	1e-59	MYB family protein