PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV91099.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 239aa MW: 27376.7 Da PI: 5.9768 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.7 | 2.4e-17 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ll + v+++G g W+++++ g++R++k+c++rw +yl RWV91099.1 21 KGPWTAQEDKLLMEHVNLHGEGKWNSVSKLTGLRRSGKSCRLRWVNYL 68 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.8 | 1.4e-14 | 74 | 139 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT....................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....................tWktIartmgkgRtlkqcksrwqky 47 rg+ T+ E+ ++ ++++++G++ +W+tIar ++ gRt++++k++w+++ RWV91099.1 74 RGNITPHEENIIQELHALWGNRysvaettisnavvfifvclcRWSTIARSLP-GRTDNEIKNYWRTH 139 7999************************************************.************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence |
MGEAMDAKFG LGTLDNEGWK KGPWTAQEDK LLMEHVNLHG EGKWNSVSKL TGLRRSGKSC 60 RLRWVNYLRP DLKRGNITPH EENIIQELHA LWGNRYSVAE TTISNAVVFI FVCLCRWSTI 120 ARSLPGRTDN EIKNYWRTHF KKSKPSKNVE KARARFLIRQ RQEDQQHQDA EQQQADVKAF 180 MEQAEEATPV EDMEEMMTYM NSVTFMLPGG GFDSYLSDGS TEEGSWGSLW NLADAPDDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G24310.1 | 1e-61 | MYB family protein |