PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV91009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 150aa MW: 17571 Da PI: 8.7762 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 183.1 | 6.7e-57 | 11 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv +yLkkk++++k++l +vik++di+++ePwdL++ ++ e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k RWV91009.1 11 VPPGFRFHPTDEELVGYYLKKKAASQKIDL-DVIKDIDICRIEPWDLQErcRIGYeEQSEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVHD-K 107 69****************************.9***************953433332566**************************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+g++ktLvfykgrap+g+ktdW+mheyrl RWV91009.1 108 NKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRL 139 99****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MQTMETMESC VPPGFRFHPT DEELVGYYLK KKAASQKIDL DVIKDIDICR IEPWDLQERC 60 RIGYEEQSEW YFFSHKDKKY PTGTRTNRAT MAGFWKATGR DKAVHDKNKL IGMRKTLVFY 120 KGRAPNGQKT DWIMHEYRLD SVENGPPQAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 5e-87 | NAC family protein |