PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV90913.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 139aa MW: 15760.9 Da PI: 10.2926 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.9 | 6.8e-10 | 102 | 139 | 3 | 47 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47 +GV++ k+ +W A I++ +k+++lg+ g+ e+Aa++++ RWV90913.1 102 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEDAARLYD 139 79**98..47*********4.....5******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
RVLHDIAGKS SFPVVLPRPI ENGNAVESPT QQVKPVSVHP MRSVDASFQK LVAKSETYSG 60 SSSASGLITS KEEPNHYYPG KEIKRRKRHR RKHYEDQEPC IMRGVYFKNM KWQAAIKVDK 120 KQIHLGTVGS QEDAARLYD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 1e-23 | ERF family protein |