PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV90099.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GATA
Protein Properties Length: 460aa    MW: 49175.9 Da    PI: 8.4713
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV90099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.15.1e-18368402135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  RWV90099.1 368 CTHCASDKTPQWRTGPLGPKTLCNACGVRYKSGRL 402
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    
MSNRPLASPT VNSNLPLRLI IGGSTTADSE QGRVPLHLRR GDHLPPYPMD SARCYSNKQQ  60
ADGIPSVHGQ QRRNAVAARS HDVREKNKIR SSEDHRPSLL PLPLAMAPEW EMATGVDFGM  120
GMEFGTGARY STTAPLVAPP LTPTTSATAT SSSYLYGALP PTADASLRVD DLLDFSNHDL  180
YPSVGLDAQF YATTSTVPGS GPLSGQTFSD RQSQHTSLDL YIPVRTSLEL QLACVLFVQQ  240
CEDAAELEWL SKFVEDSFSD VPSYQSGAAV IAPSCEAQLR AEQSANGRGA RGKRSRATIG  300
AVSAAAWSSL VAPPNPPAQN SPSSSSSSSS SEFSPSRPKA GSADTGNRSS RGKKGGGGAV  360
VEGGVRRCTH CASDKTPQWR TGPLGPKTLC NACGVRYKSG RLVPEYRPAA SPTFVLTQHS  420
NSHRKVMELR RQKELLLLPH QENDPSSARP DLLFSDYGVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.18e-47GATA family protein