PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV88710.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 436aa MW: 48157.2 Da PI: 10.7043

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV88710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	53	8.8e-17	139	228	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a +e+ +l+rg+lk++ W+ev++++ ++ g++++pk qCk++++ l+k+yk +k + s ++s++p+f++l+ RWV88710.1 139 CWSEGATSTLIDAWEERFLELSRGNLKQKNWQEVADAVtSRDGYTKTPKtdvQCKNRIDTLKKKYKIEKSKISASGSSTTSSWPLFHRLD 228 7***********************************888899998865559**********99988877778888*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MRKRCIRASY RTPKTPVKRV TPVGGRIPLQ RNPSSSRPAA ASSNLVLYIL SLSLALFPSP 60 AFAGLPRCRG KAQILESDDG GGGRRPVPVA FAVPIHLQIP VDAVVATPCL RGAPLVRTLA 120 PRTQRPRGGG GGGGGREDCW SEGATSTLID AWEERFLELS RGNLKQKNWQ EVADAVTSRD 180 GYTKTPKTDV QCKNRIDTLK KKYKIEKSKI SASGSSTTSS WPLFHRLDLL LGPNHKPTGA 240 LPPSNTKIPA GIPIRPPARL TQLIPQRHRS SHPALNKARS LPPSVSSKSA DSSSDSSDGF 300 PPPPPREANG KRQRQEPEEG EEEEEGRTAS LRELTRAILR FGEVYERVES SKLRQAMEME 360 KQRMEFTREL ESQRLEFFMK TQMELSQLKS HHHHHHGSSS SNSRKKRMDD AGGGSNHHHH 420 HDTNNNSSFN YSDNNG

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MRKRCIRASY RTPKTPVKRV TPVGGRIPLQ RNPSSSRPAA ASSNLVLYIL SLSLALFPSP  60
AFAGLPRCRG KAQILESDDG GGGRRPVPVA FAVPIHLQIP VDAVVATPCL RGAPLVRTLA  120
PRTQRPRGGG GGGGGREDCW SEGATSTLID AWEERFLELS RGNLKQKNWQ EVADAVTSRD  180
GYTKTPKTDV QCKNRIDTLK KKYKIEKSKI SASGSSTTSS WPLFHRLDLL LGPNHKPTGA  240
LPPSNTKIPA GIPIRPPARL TQLIPQRHRS SHPALNKARS LPPSVSSKSA DSSSDSSDGF  300
PPPPPREANG KRQRQEPEEG EEEEEGRTAS LRELTRAILR FGEVYERVES SKLRQAMEME  360
KQRMEFTREL ESQRLEFFMK TQMELSQLKS HHHHHHGSSS SNSRKKRMDD AGGGSNHHHH  420
HDTNNNSSFN YSDNNG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	136	RGGGGGGGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	1e-29	Trihelix family protein