PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV88519.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB_related
Protein Properties Length: 349aa    MW: 38724.5 Da    PI: 7.553
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV88519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.89.1e-1256104248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 
                      +rW  eEd +l  +vkq+G++ W++++++m   ++R +k+  +rw +yl
       RWV88519.1  56 QRWRVEEDVILRAYVKQYGPKEWNLVSQHMKvaLNRDAKSFLERWKNYL 104
                      79*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MWLRQRKQRP GEIDGTETVV VGSDMMQGAA EDEEEEVTAA SPGGEVPVTK HGVAGQRWRV  60
EEDVILRAYV KQYGPKEWNL VSQHMKVALN RDAKSFLERW KNYLRLGIKK DSLTEEQQLL  120
VRISQEEVKK LERDPSGLGC TSQDAPARMC IVHPSSYKPD VANLDRSDLS LPSLFQRYSS  180
TIVVALFLSC EDSLATSATF LYCCLPTLDS TTTNSNHCRR RSYSLPVLLS SSSSAWHCHL  240
PLLPLVAALD CPHLRLAAQP PSLSPLPLIQ PSSTIVVTPC HRPQHTKPFF FPTFTAAIVI  300
TIASVHVPLH VVVVASHCSH ILCPSLPSPP PQPTKPNDVV LDPHLVRHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37630.18e-25MYB family protein