PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV88159.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 26764.6 Da PI: 5.3601 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.6 | 4.9e-21 | 45 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f taeeAa+a++aa+++++g RWV88159.1 45 KYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEEAARAYDAAALRFRG 94 8********.**********7.....337*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
TQQYPQGGGP PPPIRGYPVP EAAMEEPSPA SSNPEEAERS EPRRKYRGVR QRPWGKWAAE 60 IRDPHKAARV WLGTFETAEE AARAYDAAAL RFRGRRAKLN FPENVRLQPS LSIPLATPSL 120 SIPLATSNSP ATTSDTMTDY LAYTRLLQGG EEHQRIPPTS LLDQYMYSNY ASPMCSTVND 180 SSSLPAPSIP TYSSLVTSSS SSSSYPPFYA SSTTEQQTNW SVVSEIPETS WMDSSQFPPP 240 SSGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 1e-28 | ERF family protein |