PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV88147.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB_related

Protein Properties

Length: 679aa MW: 71990.1 Da PI: 10.1071

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV88147.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.5	2e-10	12	46	3	38
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlk 38 W t+E++ll++av+++G+++W+++a +++ Rt+ RWV88147.1 12 IWGTWEELLLACAVNRHGTRRWDAVAIEIQ-SRTPA 46 6*****************************.88864 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MARSSDLEER EIWGTWEELL LACAVNRHGT RRWDAVAIEI QSRTPASHLI TPHGCRQRYR 60 DLQRRFRAGA VDGSSNDGGG EDDPHPPADV LWVEELRRLR VAELRREVER YDLSIGSLRL 120 KVKRLKDERE RSVRDAESGD GKPVVDAKKE VGAPGSAPES LSGNRIFSGG NSGPSCKQSN 180 STDPKHKAGE DCREPEEEAA FAGAGSDAAE PSTAGDEKAA GSYDSSTGSP AARTQAMGES 240 IAESKGVEGG EKESSDVQSS VSLSRRRGKA IFGGGGVDEP EAEEASIMSG VGTAVSQPLV 300 SILEIIRSHK YGSVFERRLD SQESARYRSI VRQHVDLEIV QAKLDRVGPE RSYATPEFFR 360 DLLLLCGNAT VFYPKDSPES AAAVHLRRLV TKKMATTTFL TPTEPTPLPP HPPPEPKPTA 420 SKSETEPDLS SGLIDKANSS PLLITCRKRS STSNKPAVAA VEEKKEEKSD PARKESDNEE 480 KSLPKKATKE RSVRPGRTRG WRTSKVRGGN GEGGPAAKRS NLAPSPCLKS KPVENVAAVG 540 EAARPYKKNT GGGAATCAAS AAKKQGSTGF LKRVKRNPKG ADEEVPKSSS GGVSGGGGGS 600 GRGTEQKKEA KGGARKEQGS RQGSTGGGGS GGSGKKVAET SGGTAKRGVG RPPKRAREEA 660 DIAAPTKAPA SASRKRGRM

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MARSSDLEER EIWGTWEELL LACAVNRHGT RRWDAVAIEI QSRTPASHLI TPHGCRQRYR  60
DLQRRFRAGA VDGSSNDGGG EDDPHPPADV LWVEELRRLR VAELRREVER YDLSIGSLRL  120
KVKRLKDERE RSVRDAESGD GKPVVDAKKE VGAPGSAPES LSGNRIFSGG NSGPSCKQSN  180
STDPKHKAGE DCREPEEEAA FAGAGSDAAE PSTAGDEKAA GSYDSSTGSP AARTQAMGES  240
IAESKGVEGG EKESSDVQSS VSLSRRRGKA IFGGGGVDEP EAEEASIMSG VGTAVSQPLV  300
SILEIIRSHK YGSVFERRLD SQESARYRSI VRQHVDLEIV QAKLDRVGPE RSYATPEFFR  360
DLLLLCGNAT VFYPKDSPES AAAVHLRRLV TKKMATTTFL TPTEPTPLPP HPPPEPKPTA  420
SKSETEPDLS SGLIDKANSS PLLITCRKRS STSNKPAVAA VEEKKEEKSD PARKESDNEE  480
KSLPKKATKE RSVRPGRTRG WRTSKVRGGN GEGGPAAKRS NLAPSPCLKS KPVENVAAVG  540
EAARPYKKNT GGGAATCAAS AAKKQGSTGF LKRVKRNPKG ADEEVPKSSS GGVSGGGGGS  600
GRGTEQKKEA KGGARKEQGS RQGSTGGGGS GGSGKKVAET SGGTAKRGVG RPPKRAREEA  660
DIAAPTKAPA SASRKRGRM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	572	611	KRVKRNPKGADEEVPKSSSGGVSGGGGGSGRGTEQKKEAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	4e-36	MYB_related family protein