PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV88139.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 145aa MW: 15790 Da PI: 6.9198 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.1 | 4.9e-06 | 98 | 137 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR++i +++ L+ l+P + +k Ka iL + ++Y++ Lq RWV88139.1 98 RRKKISERMKMLQGLVPGC----DKVTGKALILDEIINYVQCLQ 137 9*****************9....555***************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 145 aa Download sequence |
MASTHWDSAC VSKTTAEMLL LMPQQQVAVA AAAVTDFDSS SSLDTGTDAP SADGFMVRSP 60 LSSELHVSEK VQNQHGRVDH KRKSRGEASL VTGESEVRRK KISERMKMLQ GLVPGCDKVT 120 GKALILDEII NYVQCLQNQV EVNCK |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 81 | 101 | KRKSRGEASLVTGESEVRRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G50915.2 | 4e-23 | bHLH family protein |