PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV87897.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 218aa MW: 24075.1 Da PI: 9.0237 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 128.3 | 5.9e-40 | 14 | 128 | 1 | 120 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+kv +l++ vi+e+++ k++PwdLp ++ e yfFs r+ +y++g+r+n at sgyWkatgkd++v+++ ++e RWV87897.1 14 LPPGFRFHPTDEELVVQYLKRKVLCCPLPA-AVIPEINLSKYDPWDLP-----GDGERYFFSLREATYPNGSRSNGATLSGYWKATGKDRPVVASgSNE 106 79***************************9.89***************.....7889************************************996777 PP NAM 99 lvglkktLvfykgrapkgektd 120 +vg+kk+Lvf++g+ p+g++td RWV87897.1 107 VVGMKKVLVFHRGKPPRGSRTD 128 8*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MERPSFVKHG VLRLPPGFRF HPTDEELVVQ YLKRKVLCCP LPAAVIPEIN LSKYDPWDLP 60 GDGERYFFSL REATYPNGSR SNGATLSGYW KATGKDRPVV ASGSNEVVGM KKVLVFHRGK 120 PPRGSRTDCM RQTKEDWVVC RIFEKRAKML EAGNNTRRSY NDGRVRIGHV EFLDVQRSSS 180 SSSSSSSSSS CVTDLSSEEG EEGSSNGVNA SPPCGSLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 4e-65 | NAC family protein |