PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87612.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

BBR-BPC

Protein Properties

Length: 473aa MW: 52461.8 Da PI: 10.7713

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87612.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	300.1	8.2e-92	193	473	18	301
GAGA_bind 18 aslkenlglqlmssiaerdakirernlalsekkaavaerd..maflqrdkalaernkalve...rdnkllalllvensla........salpvgvqvls 103 +s k nlgl+lmssi e+dak+ +n+ +++++ ++ e ++f +d ++++ n++ + rd + + ++ + +++ ++++vl+ RWV87612.1 193 PSSKGNLGLRLMSSIVEQDAKPLLSNAGFIHRHCSIPEPTapVDF-VSDGWFHHSNDSSKNdyvRDGLMRHTNNNS---KnlhilptsNQHHPTYGVLP 287 67799*************************9999765545888.899999995544332111332222222222...24546676655566788888 PP GAGA_bind 104 gtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvs 202 + +i+++q+l++ +l+ + + p+++++ +++++ kk r++++k +k k++kk +++k++v++ sa ++ k+ +ks+++v+ng++ RWV87612.1 288 EPPTIENVQMLQHLELQSKDDK---------VPMTDETV-VRNESPLKKAPRGRSQKPPKPKNPKKV-TAPKDEVANGSA-SHGKSGRKSTGMVINGIN 374 8888888888777666544433.........44444333.333344444667777777888888884.456667766664.689*********** PP GAGA_bind 203 lDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +D+s++P+PvCsCtG+++qCY+WG GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmS+gafkk+LekLa+eGy+lsnp+DL+++WAkHGtnkfvtir RWV87612.1 375 FDISRIPTPVCSCTGKQQQCYRWGIGGWQSACCTTSVSMYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLSNPIDLRTFWAKHGTNKFVTIR 473 ************************************************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MCGQQSSPTP PLISLDPSLT INAGPTAPST SEDDSAPSSQ RVFSCSYCRR KFFSSQALGG 60 HQNAHKRERT LAKRALSSHA FLPRSHASIA SLRLHASTLR SLEIKAHSSV HPKWREIHGS 120 SRRCGKGLLE PRPVFREDEE MKFRWPGSFR PMADFAHLRT FTLQRSQFGI LKIRSFHLHP 180 GPQTAGFIVA SLPSSKGNLG LRLMSSIVEQ DAKPLLSNAG FIHRHCSIPE PTAPVDFVSD 240 GWFHHSNDSS KNDYVRDGLM RHTNNNSKNL HILPTSNQHH PTYGVLPEPP TIENVQMLQH 300 LELQSKDDKV PMTDETVVRN ESPLKKAPRG RSQKPPKPKN PKKVTAPKDE VANGSASHGK 360 SGRKSTGMVI NGINFDISRI PTPVCSCTGK QQQCYRWGIG GWQSACCTTS VSMYPLPMST 420 KRRGARIAGR KMSHGAFKKV LEKLAGEGYN LSNPIDLRTF WAKHGTNKFV TIR

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MCGQQSSPTP PLISLDPSLT INAGPTAPST SEDDSAPSSQ RVFSCSYCRR KFFSSQALGG  60
HQNAHKRERT LAKRALSSHA FLPRSHASIA SLRLHASTLR SLEIKAHSSV HPKWREIHGS  120
SRRCGKGLLE PRPVFREDEE MKFRWPGSFR PMADFAHLRT FTLQRSQFGI LKIRSFHLHP  180
GPQTAGFIVA SLPSSKGNLG LRLMSSIVEQ DAKPLLSNAG FIHRHCSIPE PTAPVDFVSD  240
GWFHHSNDSS KNDYVRDGLM RHTNNNSKNL HILPTSNQHH PTYGVLPEPP TIENVQMLQH  300
LELQSKDDKV PMTDETVVRN ESPLKKAPRG RSQKPPKPKN PKKVTAPKDE VANGSASHGK  360
SGRKSTGMVI NGINFDISRI PTPVCSCTGK QQQCYRWGIG GWQSACCTTS VSMYPLPMST  420
KRRGARIAGR KMSHGAFKKV LEKLAGEGYN LSNPIDLRTF WAKHGTNKFV TIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14685.1	5e-70	BBR-BPC family protein