PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV87557.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 249aa MW: 27714.4 Da PI: 9.4799 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.4 | 1.8e-09 | 14 | 45 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd++lv +++ +G g+W++ ++ g RWV87557.1 14 KGAWTKEEDLRLVSYINAHGEGCWRSLPKAAG 45 79************************999887 PP | |||||||
2 | Myb_DNA-binding | 29.7 | 1.5e-09 | 85 | 109 | 22 | 47 |
T-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqky 47 ++W+ Iar+++ gRt++++k++w+++ RWV87557.1 85 RRWSVIARRLP-GRTDNEIKNYWNTH 109 47*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDLRLVSYIN AHGEGCWRSL PKAAGLLHLP YCHLISSPLP 60 SFFPDIVVFR PSTVRQERIP RFRVRRWSVI ARRLPGRTDN EIKNYWNTHI RRKLLGRGLD 120 PQTHRPIGGD SQSTASCEQH ACSGVTMDQG RRRCPDLNLH LDLTMSVPYA SPRSSTSSEV 180 LTAPAEAEAE ATTPASVLPH ARTICFCYHL GFRSSQVCSC QTSSTAPVLG RREPNHSSRA 240 SSSARHQSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 8e-51 | MYB family protein |