PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87453.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 276aa MW: 30828.6 Da PI: 6.7073

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24	9.3e-08	62	93	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT++Ed llv+ v+++G ++W+ a+ g RWV87453.1 62 KGPWTEQEDSLLVRFVRLFGERRWDCLAKVSG 93 79**********************98877666 PP
2	Myb_DNA-binding	58	2.2e-18	115	159	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 gr+T+eE+ l +d+++++G++ W++Iar+++ gRt++++k++w++++ RWV87453.1 115 GRMTPEEEHLVLDLHAKWGNR-WSRIARCLP-GRTDNEIKNYWRTHM 159 89*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MYVASTSSGA PKIDTDSGEP LGKNRYGIDY YRAKPTSPKA GEDDGRRRVR LAMAPKTEEM 60 RKGPWTEQED SLLVRFVRLF GERRWDCLAK VSGLSCGGGH VLRWVNYLHP DLRHGRMTPE 120 EEHLVLDLHA KWGNRWSRIA RCLPGRTDNE IKNYWRTHMR RKAQERKTSA YPSSSSSSSS 180 SSSSSSSSCS PPAAAGVVQS EGVKVYSMDE IWDEIAAADS VTGLTAEECG VACPPLPCPK 240 WEDCSESLWK VDDEFKMATV LLPVDDLMLS DFHHSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	9e-69	MYB family protein