PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV87040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 311aa MW: 33446.5 Da PI: 4.9071 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.6 | 9e-11 | 14 | 45 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd++lvd+++ +G g+W++ ++ g RWV87040.1 14 KGPWTPEEDKILVDYIQSHGHGSWRSLPKLAG 45 79*************************99987 PP | |||||||
2 | Myb_DNA-binding | 22 | 3.9e-07 | 74 | 110 | 11 | 48 |
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ll++a ++ +t + I++ ++ gRt++++k++w+++l RWV87040.1 74 LLIHALALQSQPTMEYISAQLP-GRTDNEIKNFWNTHL 110 788999999999999*******.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MGRAPCCDKS GLKKGPWTPE EDKILVDYIQ SHGHGSWRSL PKLAGLSPIL LLLSFKYQTC 60 YFPSSQLISF SCLLLIHALA LQSQPTMEYI SAQLPGRTDN EIKNFWNTHL KKRLLRMGLL 120 HPDPSDTSPA AAASRHMAQW EGARLEAEAR LSRESLFAHS ASAAAAAAVT NLSVNLPPLK 180 PEPDFFLRIW NSNVGDAFRK TAAASATGES SPESSFTRQS SAAVVKTEPP PAAREETESK 240 SCVTGSGPPV VAGMDDSSGS NDVVDDVSEE SYQLYLDFGS GDDDLGLFGG QVGAFSSLFC 300 SDLNVETSLD C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 2e-50 | MYB family protein |