PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV86885.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YA | ||||||||
Protein Properties | Length: 211aa MW: 23164.5 Da PI: 10.181 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 75.6 | 1e-23 | 14 | 102 | 2 | 58 |
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekk................................ldeksrkpylheSRhkhAlrRpRgsgGrF 58 p+YVNaKQ+++Il+RR++Ra++e+e+k + + +pylheSRh hAlrR Rg++GrF RWV86885.1 14 GPIYVNAKQFNAILRRRKARAMAEKENKsikvrkvcisydtkkilriigsdflvyfeclkIGFTFLQPYLHESRHIHALRRVRGCSGRF 102 7*********************************************************99556789**********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
HGRMLLPMAV ATQGPIYVNA KQFNAILRRR KARAMAEKEN KSIKVRKVCI SYDTKKILRI 60 IGSDFLVYFE CLKIGFTFLQ PYLHESRHIH ALRRVRGCSG RFVNTKKEGN GGCKVKEWMP 120 SQPANFEARS ETLHSGNLKM NSASSRSSAS GSEVTSVCAR EDIGDFHIVD NQSPSGFSSH 180 LSMTNGGQGA SIGGRWGAAA DGCCDPDLLK V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G14020.1 | 5e-17 | NF-YA family protein |