PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86399.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

WRKY

Protein Properties

Length: 433aa MW: 47039.2 Da PI: 6.1006

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.1	1.5e-32	37	94	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y+g Hnh+k RWV86399.1 37 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-EGHITEIVYKGAHNHPK 94 8**************************************.*************85 PP
2	WRKY	29.8	1.2e-09	256	284	31	59
T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 31 gCpvkkkversaedpkvveitYegeHnhe 59 +C+v+k++er+++d k v++tYeg+Hnh+ RWV86399.1 256 RCMVRKHIERASHDLKSVITTYEGKHNHD 284 6***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MTDLLVASHH SPAVNDQEDG DADLRGELST TVGTPAEDGY NWRKYGQKQV KGSEYPRSYY 60 KCTHPNCQVK KKVERSHEGH ITEIVYKGAH NHPKPHVNRR SGVPSSHPFN DPQINELEQP 120 GSQTSFDGKP VKGSSQSGNG GQEWLGDGLE ATSSAPVAAE CCDPSNALQQ IQDGTRLSPD 180 VIGVSSTLSN DEEEDDRATH GSVSLGCDGE GDETESKRRK LDACAIEMSA ASRAVREPRV 240 VVQTTSEIDI LDDGYRCMVR KHIERASHDL KSVITTYEGK HNHDVPAARS NSHINSAPSN 300 TAPISAPQPH SLQQRPEPTQ DCFVRFDGHT ALNAFSFPGR EQLGSATSFP FALGQPGLTN 360 LAMAGLGPMA AMKMSVMPPV HPYLAHLQPA EAGYMIPKLE PKEETVPDSV LSMSNAASVY 420 YQMMSRLPLR PQL

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MTDLLVASHH SPAVNDQEDG DADLRGELST TVGTPAEDGY NWRKYGQKQV KGSEYPRSYY  60
KCTHPNCQVK KKVERSHEGH ITEIVYKGAH NHPKPHVNRR SGVPSSHPFN DPQINELEQP  120
GSQTSFDGKP VKGSSQSGNG GQEWLGDGLE ATSSAPVAAE CCDPSNALQQ IQDGTRLSPD  180
VIGVSSTLSN DEEEDDRATH GSVSLGCDGE GDETESKRRK LDACAIEMSA ASRAVREPRV  240
VVQTTSEIDI LDDGYRCMVR KHIERASHDL KSVITTYEGK HNHDVPAARS NSHINSAPSN  300
TAPISAPQPH SLQQRPEPTQ DCFVRFDGHT ALNAFSFPGR EQLGSATSFP FALGQPGLTN  360
LAMAGLGPMA AMKMSVMPPV HPYLAHLQPA EAGYMIPKLE PKEETVPDSV LSMSNAASVY  420
YQMMSRLPLR PQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	3e-95	WRKY family protein