PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV85758.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 288aa MW: 32837.2 Da PI: 8.841

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV85758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.1e-17	55	102	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +++ +G g+W++ ++ g++R++k+c++rw +yl RWV85758.1 55 KGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLHRCGKSCRLRWINYL 102 79********************************************97 PP
2	Myb_DNA-binding	50.5	4.7e-16	108	168	1	47
TSSS-HHHHHHHHHHHHHTTTT...............-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...............tWktIartmgkgRtlkqcksrwqky 47 rg++T+ Edel+++++ lG++ +W++Ia +++ gRt++++k++w+++ RWV85758.1 108 RGNFTQVEDELIINLHSHLGNNyssdvmlngnsdellRWSLIAGRLP-GRTDNEIKNYWNTH 168 89*******************************************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MSSFFCSPTR LEVFPPPSTI YSRKEEGEEG RGFYSCRFLG EMGRSPRCEK AHINKGAWTK 60 EEDDRLVAYI RAHGEGCWRS LPKAAGLHRC GKSCRLRWIN YLRPGLKRGN FTQVEDELII 120 NLHSHLGNNY SSDVMLNGNS DELLRWSLIA GRLPGRTDNE IKNYWNTHIR RKLLSRGIDP 180 ETRRLIHAPV SDFTMSFAKG EDKDRSLLPC EQEKVIGSSS SSSSSRSREG SWQIQRHRCP 240 DLNLDLGLSP PPSQQQVEEC TRCFSRCRGL QLTRKECKCD AFLGLGVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16720.1	1e-78	MYB family protein